Molasses Books (Bushwick) - I always find something good here. They have a tiny little bar so you can get coffee, tea, beer or wine. Always a nice ambiance
Honeymoon Coffee (Ridgewood) - their books are curated by Molasses so it’s a nice selection & the coffee/treats are good
Topos Bookstore (Ridgewood) - great selection of books, though I find more at Molasses typically. They also have coffee/tea! Cute outdoor seating area
Aeon Books (LES/Chinatown) - maybe my favorite bookstore. Lovely selection of old and new. They also have a little corner with records for sale (Found a cool Francis Bebey record there once)
Dashwood Bookstore (NOHO I guess?) - owner is so sweet & the photo book selection is incredible